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Journal Articles
2012
Cyclic
Peptide Inhibitors of HIV-1 Capsid-Human Lysyl-tRNA Synthetase
Interaction. Dewan V, Liu T, Chen KM, Qian Z, Niu M, Kleiman
L, Mahasenan K, Li C, Matsuo H, Pei D, Musier-Forsyth K. ACS Chem Biol.
2012 Jan 25. [Epub ahead of print]
Substrate
Specificity of Bacterial Prolyl-tRNA Synthetase Editing Domain Is
Controlled by a Tunable Hydrophobic Pocket. Kumar S,
Das M,
Hadad CM, Musier-Forsyth K. J Biol Chem. 2012 Jan 27;287(5):3175-84.
Epub 2011 Nov 29
2011
FRET
analysis reveals distinct conformations of IN tetramers in the presence
of viral DNA or LEDGF/p75.
Kessl
JJ, Li M, Ignatov M, Shkriabai N,
Eidahl JO, Feng L, Musier-Forsyth K, Craigie R, Kvaratskhelia M.
Nucleic Acids Res. 2011 Nov 1;39(20):9009-22. Epub 2011 Jul
19
Substrate-mediated fidelity mechanism ensures accurate decoding of
proline codons. So BR, An S, Kumar S, Das M, Turner DA, Hadad CM,
Musier-Forsyth K. J Biol Chem. 2011 Sep 9;286(36):31810-20. Epub 2011
Jul 18.
Diverse
interactions of
retroviral Gag proteins with RNAs. Rein A, Datta SA, Jones
CP, Musier-Forsyth K.Trends Biochem Sci
(2011). Trends in Biochemical Sciences, 36, 373-380
HIV-integrase
aptamer folds into a parallel quadruplex: a thermodynamic
study. Kelley S, Boroda S, Musier-Forsyth K, Kankia BI.
Biophys Chem.
2011 May;155(2-3):82-8
Matrix
domain modulates HIV-1 Gag’s nucleic acid chaperone activity
via inositol phosphate binding. Jones CP, Datta SA,
Rein A, Rouzina I, Musier-Forsyth K. J Virol 2011;
85(4):1594-603
Features of double-stranded
RNA-binding domains of RNA helicase A are
necessary for selective recognition and translation of complex mRNAs.
Ranji A, Shkriabai N, Kvaratskhelia M, Musier-Forsyth K, Boris-Lawrie
K. J Biol Chem. 2011 Feb 18;286(7):5328-37.
2010
RNA
remodeling by chaperones and helicases. Musier-Forsyth K. RNA
Biol.
2010 Nov-Dec;7(6):632-3
Role
of HIV-1 nucleocapsid protein in HIV-1 reverse transcription.
Levin JG, Mitra M, Mascarenhas A, Musier-Forsyth K. RNA Biol. 2010
Nov-Dec;7(6):754-74
Comparative
analysis of RNA/protein dynamics for the
arginine-rich-binding motif and zinc-finger-binding motif proteins
encoded by HIV-1. Wang H, Ma X, Yeh YS, Zhu Y, Daugherty MD,
Frankel
AD, Musier-Forsyth K, Barbara PF. Biophys J. 2010 Nov 17;99(10):3454-62.
Formation
of the tRNALys packaging complex in HIV-1. Lawrence Kleiman,
Christopher Jones, and Karin Musier-Forsyth (2010)
FEBS Letters
584, 359-365
C-terminal
domain regulates the nucleic acid chaperone activity of
human T-cell leukemia virus type 1 (HTLV-1) nucleocapsid protein (NC)
via an electrostatic mechanism. Dominic F. Qualley, Kristen
M.
Stewart-Maynard, Fei Wang, Mithun Mitra, Robert J. Gorelick, Ioulia
Rouzina, Mark C. Williams and Karin Musier-Forsyth (2010) J. Biol.
Chem. 285, 295-307.
2009
The
capsid protein of human immunodeficiency virus: interactions of HIV-1
capsid with host protein factors, Anjali P. Mascarenhas and Karin Musier-Forsyth
(2009) FEBS Journal, 276, 6118-6127.
Fidelity of
plus-strand priming requires the
nucleic acid chaperone activity of HIV-1 nucleocapsid protein,
Klara Post,
Besik Kankia, Swathi Gopalakrishnan, Victoria Yang, Elizabeth Cramer,
Pilar
Saladores, Robert J. Gorelick, Jianhui Guo, Karin Musier-Forsyth, and
Judith G.
Levin, (2009) Nucleic Acids
Res. 37, 1755-66.
HIV-1
Nucleocapsid Protein Switches the
Pathway of TAR RNA/DNA Annealing. My-Nuong Vo, George Barany,
Ioulia Rouzina,
and Karin Musier-Forsyth (2009) J. Mol.
Biol. 386, 789-801.
Effect of Mg2+ and Na+
on the Nucleic Acid Chaperone Activity of HIV-1 Nucleocapsid protein:
Implications for Reverse Transcription. My-Nuong Vo, George
Barany, Ioulia
Rouzina, and Karin Musier-Forsyth (2009) J.
Mol. Biol. 386, 773-788.
Resampling
and editing of mischarged tRNA prior to translation elongation.
Jiqiang Ling,
Byung-Ran So, Srujana S. Yadavalli, Herve Roy, Shinichiro Shoji, Kurt
Fredrick,
Karin Musier-Forsyth and Michael Ibba (2009) Molecular
Cell 33, 654-660.
Fluorescence
Fluctuation Spectroscopy on Viral-Like Particles Reveals Variable Gag
Stoichiometry. Yan Chen, Bin Wu, Karin Musier-Forsyth, Louis
M. Mansky,
and Joachim D. Mueller (2009), Biophys. J., 96, 1961-69.
2008
Inability of HIV-1 Produced in
Murine
Cells to Selectively Incorporate Primer tRNALys,3.
Min Wei, Yilang
Yang, Meijuan Niu, Laurie Desfosse, Robert Kennedy, Karin
Musier-Forsyth, and
Lawrence Kleiman (2008) J.
Virol. 82,
12049-59.
Retroviral
Nucleocapsid Proteins Display
Non-equivalent Levels of Nucleic Acid Chaperone Activity. Kristen
M.
Stewart-Maynard, Margareta Cruceanu, Fei Wang, My-Nuong Vo, Robert J.
Gorelick,
Mark C. Williams, Ioulia Rouzina, and Karin Musier-Forsyth (2008), J. Virol., 82, 10129-42
Functional
Guanine-Arginine Interaction Between tRNAPro
and Prolyl-tRNA
Synthetase that Couples Binding and Catalysis. Brian Burke,
Songon An and Karin
Musier-Forsyth (2008)
Biochemica
Biophysica Acta - Proteins and Proteomics.
Transfer RNA
Modulates The Editing Mechanism
Used By Class II Prolyl-tRNA Synthetase.
Kathryn E.
Splan, Michael
Ignatov and Karin Musier-Forsyth (2008) J.
Biol. Chem. 283, 7128-34.
Crystal
structure of novel tetrameric form of human lysyl-tRNA synthetase:
Implications
for multi-synthetase complex and new synthetase functions. Min Guo, Michael
Ignatov, Karin Musier-Forsyth, Paul Schimmel and Xiang-Lei Yang (2008) Proc. Natl. Acad. Sci. USA, 105, 2331-36
Evolution of
Acceptor Stem tRNA Recognition by Class II Prolyl-tRNA Synthetase. Songon An, George Barany and
Karin
Musier-Forsyth (2008) Nucleic
Acids Res.
36, 2514-2521.
2007
Insights
on the Role of Nucleic Acid/Protein Interactions in Chaperoned Nucleic
Acid Rearrangements of HIV-1 Reverse Transcription. Hsiao-Wei Liu,
Yining Zeng, Christy F. Landes, Yoen Joo Kim, Yongjin Zhu, Xiaojing Ma,
My-Nuong Vo, Karin Musier-Forsyth, and Paul F. Barbara (2007) Proc.
Natl. Acad. Sci. USA, 104,
5261-5267.
Probing
Nucleation, Reverse Annealing, and Chaperone Function along the
Reaction Path of HIV-1 Single Strand Transfer.
Yining Zeng, Hsiao-Wei Liu, Christy F. Landes, Yoen Joo Kim, Xiaojing
Ma, Yongjin Zhu, Karin Musier-Forsyth, Paul F. Barbara (2007) Proc.
Natl. Acad. Sci. USA, 104, 12651-12656.
Single
Molecule Study of the Inhibition of HIV-1 Transactivation Response
Region DNA:DNA Annealing by Argininamide. Christy F. Landes, Yining Zeng,
Hsiao-Wei Liu, Karin Musier-Forsyth, Paul F. Barbara (2007) J. Am Chem. Soc. 129(33), 10181-88.
Deaminase-independent
inhibition of HIV-1 reverse transcription by APOBEC3G. Yasumasa
Iwatani, Denise S.B. Chan, F. Wang, Kristen Stewart Maynard, Wataru
Sugiura, Angela Gronenborn, Ioulia Rouzina, Mark C. Williams, Karin
Musier-Forsyth, and Judith G. Levin. (2007) Nucleic Acids Res. 35, 7096-7108.
Critical
Role of Helix 4 of HIV-1 Capsid C-terminal Domain in Interactions with
Human Lysyl-tRNA Synthetase.
Brandie J. Kovaleski, Robert Kennedy, Ahmad Khorchid, Lawrence Kleiman,
Hiroshi Matsuo, and Karin Musier-Forsyth. (2007). J.
Biol. Chem. 282,
32274 – 32279.
The HIV-1 Central DNA Flap Region
Contains a “Flapping” Third Strand. Besik
I. Kankia and Karin Musier-Forsyth (2007) Biophysical
Chemistry, 127,
64-68 (2007).
Restoring
species-specific posttransfer
editing activity to a synthetase with a defunct editing domain.
Julius
SternJohn, Sanchita Hati, Paul G. Siliciano and Karin Musier-Forsyth
(2007) Proc. Natl. Acad. Sci. USA, 104,
2127-2132.
2006
Rapid
kinetics of protein-nucleic acid interaction is a major component of
HIV-1 nucleocapsid protein's nucleic acid chaperone function.
Margareta Cruceanu, Robert J. Gorelick, Karin Musier-Forsyth, Ioulia
Rouzina, and Mark C. Williams (2006) J. Mol. Biol.,
363(5), 867-77.
Mechanistic studies of
mini-TAR RNA/DNA annealing in the absence and presence of HIV-1
nucleocapsid protein. My-Nuong Vo, George Barany, Ioulia
Rouzina, and Karin Musier-Forsyth (2006) J. Mol. Biol., 363,
244-61.
Pre-transfer Editing by Class II Escherichia
coli Prolyl-tRNA Synthetases: Role of Aminoacylation Active
Site in “Selective Release” of Noncognate Amino
Acids.
Sanchita Hati, Brigitte Ziervogel, Julius SternJohn, Fai-Chu Wong,
Maria C. Nagan, Abbey E. Rosen, Paul G. Siliciano, Joe Chihade and
Karin Musier-Forsyth (2006) J. Biol. Chem., 281,
27862 - 27872.
In vitro
characterization of the interaction between HIV-1 Gag and human
lysyl-tRNA synthetase. Brandie J. Kovaleski, Robert Kennedy,
Minh K. Hong, Siddhartha A. Datta, Lawrence kleiman, Alan Rein, and
Karin Musier-Forsyth (2006) J. Biol. Chem., 281
(28): 19449-56.
Evolutionary
conservation of a functionally important backbone phosphate group
critical for aminoacylation of histidine tRNAs. Abbey E.
Rosen, Bonnie S. Brooks, Ethan Guth, Christopher S. Francklyn, and
Karin Musier-Forsyth (2006) RNA,12
(7):1315-22.
Evidence for
Non-Two-State Kinetics in the Nucleocapsid Protein Chaperoned Opening
of DNA Hairpins. Cosa, G.; Zeng, Y.; Liu, H.W.; Landes, C.F.;
Musier-Forsyth, K.; Barbara, P. (2006) J. Phys. Chem. B.,
110 (5), 2419.
2005
Sequence-encoded
Self-Assembly of Multiple Nanocomponent Arrays by 2D DNA scaffolding.
Yariv Pinto, John D. Le, Nadrian C. Seeman, Karin Musier-Forsyth, T.
Andrew Taton, and Richard A. Kiehl (2005) Nano Lett. 5,
2399-2402.
Single-Molecule FRET Studies of
Important Intermediates in the Nucleocapsid Protein Chaperoned
Minus-Strand Transfer Step in HIV-1 Reverse Transcription.
Hsiao-Wei Liu, Gonzalo Cosa, Christy F. Landes, Yining Zeng, Brandie J.
Kovaleski, Daniel G. Mullen, George Barany, Karin Musier-Forsyth and
Paul F. Barbara (2005) Biophysical Journal, 89
(5):3470-9.
Cys-tRNA(Pro) editing by
Haemophilus influenzae YbaK via a novel synthetase/YbaK/tRNA ternary
complex. Songon An and Karin Musier-Forsyth (2005) J.
Biol. Chem., 280(41):34465-72.
Unfolding of DNA Quadruplexes
Induced by the HIV-1 Nucleocapsid Protein. Besik Kankia,
George Barany and Karin Musier-Forsyth (2005) Nucleic Acids
Res. 33, 4395-4403.
2004
DNA-Templated
Self-Assembly of Metallic Nanocomponent
Arrays on a Surface. John D. Le, Yariv
Pinto, Nadrian C. Seeman, Karin Musier-Forsyth, T. Andrew Taton,
Richard A. Kiehl (2004) Nano Lett., 4
(12), 2343 -2347.
"Secondary
Structure and Secondary Structure Dynamics of DNA Hairpins Complexed
with HIV-1 NC Protein" Gonzalo Cosa, Elizabeth J. Harbron,
Yining Zeng, Hsiao-Wei Liu, Donald B. O'Connor, Chie Eta-Hosokawa,
Karin Musier-Forsyth and Paul F. Barbara (2004) Biophysical
Journal, 87, 2759-2767.
"Trans-editing
of Cys-tRNAPro
by Haemophilus influenzae YbaK protein"
Songon An and Karin Musier-Forsyth (2004) J. Biol. Chem.,
279, 42359-42362. (Accelerated
Publication).
"Nuclear
Localization of Aminoacyl-tRNA Synthetases Using Single-Cell Capillary
Electrophoresis Laser-Induced Fluorescence Analysis." Nilhan
Gunasekera, Sang Won Lee, Sunghoon Kim, Karin Musier-Forsyth, and Edgar
Arriaga (2004) Analytical Chemistry, 76,
4741-4746.
Single Molecule Observation of
Transactivation Response Region DNA Melting Induced by HIV-1
Nucleocapsid Protein. Gonzalo Cosa, Elizabeth J. Harbron,
Donald B. O’Connor, Chie Eta, Karin Musier-Forsyth, and Paul
F. Barbara (2004) Biophys. J. 87,
2759-2767.
"A
capillary electrophoretic method for monitoring the presence of small
alpha, Greek-tubulin in nuclear preparations." Nilhan
Gunasekera, Karin Musier-Forsyth, and Edgar Arriaga (2004) Analytical
Biochemistry, 330, 1-9.
"Mechanistic
Insights into the Kinetics of HIV-1 Nucleocapsid Protein-facilitated
tRNA Annealing to the Primer Binding Site." Michele R. S.
Hargittai, Robert J. Gorelick, Ioulia Rouzina, Karin Musier-Forsyth
(2004) Journal of Molecular Biology, 337,
951-968.
"Capillary
Electrophoretic Separation of Nuclei Released from Single Cells."
Nilhan Gunasekera, Karen J. Olson, Karin Musier-Forsyth, and Edgar A.
Arriaga (2004) Analytical Chemistry, 76,
655-662.
"Recognition
of G-1:C73 Atomic Groups by Escherichia coli
Histidyl-tRNA Synthetase." Abbey E. Rosen and Karin
Musier-Forsyth (2004) Journal of the American Chemical
Society, 126, 64-65.
2003
"G-1:C73
Recognition by an Arginine Cluster in the Active Site of Escherichia
coli Histidyl-tRNA Synthetase." Susan A. Connolly,
Abbey E. Rosen, Karin Musier-Forsyth, and Christopher S. Francklyn
(2003) Biochemistry, 43,
962-969.
"Effect
of G-1 on Histidine tRNA Microhelix Conformation." Mahadevan
Seetharaman, Caroline Williams, Christopher J. Cramer and Karin
Musier-Forsyth (2003) Nucleic Acids Research, 31,
7311-7321.
"An
Isolated Class II Aminoacyl-tRNA Synthetase Insertion Domain Is
Functional in Amino Acid Editing." Fai-Chu Wong, Penny J.
Beuning, Carmen Silvers and Karin Musier-Forsyth (2003) J.
Biological Chemistry, 278, 52857-52864.
"Zinc
Finger-Dependent HIV-1 Nucleocapsid Protein-TAR RNA Interactions."
Nick Lee, Robert J. Gorelick, and Karin Musier-Forsyth (2003) Nucleic
Acids Research, 31, 4847-4855.
"Insights
into the regioselective reactivity and RNA binding affinity of HIV-1
nucleocapsid protein from novel applications of linear-scaling
semiempirical methods." Jana Khandogin, Karin Musier-Forsyth,
and Darrin M. York (2003) J. Molecular Biology, 330,
993-1004.
"The
Interaction Between HIV-1 Gag and Human Lysyl-tRNA Synthetase During
Viral Assembly."
Hassan Javanbakht, Rabih Halwani, Shan Cen, Jenan Sadaatmand, Karin
Musier-Forsyth, Heinrich Gottlinger, and Lawrence Kleiman (2003) J.
Biological Chemistry, 278, 27644-27651.
"Efficient
Initiation of HIV-1 Reverse Transcription In Vitro:
Requirement for RNA Sequences Downstream of the Primer Binding Site
Abrogated by Nucleocapsid Protein-dependent Primer-Template
Interactions." Yasumasa Iwatani, Abbey E. Rosen, Jianhui Guo,
Karin Musier-Forsyth, and Judith G. Levin (2003) J.
Biological Chemistry, 278, 14185-14195.
"Does
active learning through an antisense jigsaw make sense?"
Mahadevan Seetharaman and Karin Musier-Forsyth (2003) Journal
of Chemical Education, 80, 1404.
"Nucleic
acid conformational changes essential for HIV-1 nucleocapsid
protein-mediated inhibition of self-priming in minus-strand transfer."
Minh Hong, Elizabeth Harbron, Donald O'Connor, Jianhui Guo, Paul
Barbara, Judith G. Levin and Karin Musier-Forsyth (2003) J.
Molecular Biology, 325, 1-10.
2002
"Retrovirus-specific packaging of
aminoacyl-tRNA synthetases with cognate primer tRNAs." Shan
Cen, Hassan Javanbakht, Sunghoon Kim, Kiyotaka Shiba, Rebecca Craven,
Alan Rein, Karla Ewalt, Paul Schimmel, Karin Musier-Forsyth, and
Lawrence Kleiman (2002) J. Virol, 76,
13111-13115.
"Discrimination
of C1:G72 microhelixAla by
AlaRS is based on specific atomic groups rather than conformational
effects: An
NMR and MD analysis. "Deborah A. Kallick, Maria
C. Nagan, Penny J. Beuning, Stephanie Kerimo,
Michael R. Tessmer, Christopher J. Cramer, and Karin Musier-Forsyth,
(2002), Journal of Physical Chemistry B, 106,
8878-8884.
"Self-Assembly
of Metallic Nanoparticle Arrays by DNA Scaffolding."
Shoujun Xiao, Furong Liu, Abbey E. Rosen, James F. Hainfeld, Nadrian C.
Seeman, Karin Musier-Forsyth, and Richard A. Kiehl (2002) Journal
of Nanoparticle Research, 4, 313-317.
"Correlation
Between tRNALys3
Aminoacylation and Its Incorporation into HIV-1." Hassan
Javanbakht, Shan Cen, Juliana Gabor, Karin Musier-Forsyth, and Lawrence
Kleiman (2002) J. Biol. Chem., 277,
17389-96.
"Specific
zinc finger architecture required for HIV-1 nucleocapsid protein's
nucleic acid chaperone function." Mark C. Williams, Robert J.
Gorelick, Karin Musier-Forsyth (2002) Proc. Natl. Acad. Sci.
USA, 99, 8614-19.
"Efficient
Aminoacylation of the tRNAAla
Acceptor Stem: Dependence on 2:71 Base Pair." Penny J.
Beuning, Maria C. Nagan, Christopher J. Cramer, and Karin
Musier-Forsyth, Josep-Lluis Gelp, Donald Bashford, (2002) RNA,
8, 1-12.
"Functional
Role of the Prokaryotic Proline-tRNA Synthetase Insertion
Domain in Amino Acid Editing." Fai-Chu Wong, Penny Beuning,
Maria Nagan, Kiyotaka Shiba, and Karin Musier-Forsyth (2002) Biochemistry,
41, 7108-7115.
"Amino
Acid Activation of a Dual-Specificity tRNA Synthetase Is Independent of
tRNA" Richard S.A. Lipman, Penny J. Beuning, Karin
Musier-Forsyth, and Ya-Ming Hou. (2002) J. Mol. Biol.,
316 421-427.
"Electrophoretic
behavior of individual nuclear species isolated from cultured mammalian
cells." Nilhan Gunasekera, Karin Musier-Forsyth, and Edgar
Arriaga. (2002) Electrophoresis, 23,
2110-2116.
2001
"HIV-1
nucleocapsid protein zinc finger structures induce tRNALys,3
tertiary structural changes but are not critical for primer/template
annealing." Michele R. S. Hargittai, Anil T. Mangla, Robert
J. Gorelick, and Karin Musier-Forsyth J. Mol. Biol.,
312 985-997 (2001).
"Species-specific
differences in amino acid editing by class II prolyl-tRNA synthetase."
Penny J. Beuning and Karin Musier-Forsyth J. Biol. Chem.
276 30779-30785 (2001).
"Divergent
Adaptation of tRNA Recognition by Methanococcus jannaschii
Prolyl-tRNA Synthetase" Brian Burke, Richard S. A. Lipman,
Kiyotaka Shiba, Karin Musier-Forsyth, and Ya-Ming Hou J.
Biol. Chem 276 20286-20291 (2001).
"Incorporation
of Lysyl-tRNA Synthetase into Human Immunodeficiency Virus Type 1."
Shan Cen, Ahmad Khorchid, Hassan Javanbakht, Juliana Gabor, Timothy
Stello, Kiyotaka Shiba, Karin Musier-Forsyth, and Lawrence Kleiman
(2001) J. Virol., 75, 5043-5048.
"Mechanism
for nucleic acid chaperone activity of HIV-1 nucleocapsid protein
revealed by single molecule stretching" Mark C. Williams,
Ioulia Rouzina, Jay R. Wenner, Robert J. Gorelick, Karin
Musier-Forsyth, and Victor A. Bloomfield Proc. Natl. Acad.
Sci. USA 98 6121-6126(2001).
2000
"Evolutionary
Co-adaptation of the Motif 2-Acceptor Stem Interaction in the Class II
Prolyl-tRNA Synthetase System" B. Burke, F. Yang, F. Chen, C.
Stehlin, B. Chan and K. Musier-Forsyth Biochemistry
39 15540-15547 (2000).
"Use
of Terbium as a Probe of tRNA Tertiary Structure and Folding"
M. R. Seffernick Hargittai and K. Musier-Forsyth RNA
6 1672-1680 (2000).
"Hydrolytic
Editing by a Class II Aminoacyl-tRNA Synthetase" P. Beuning
and K. Musier-Forsyth Proceedings of the National Academy of
Sciences 97 8916-8920 (2000).
"Importance
of Discriminator-Base Stacking Interactions: Molecular Dynamics
Analysis of A73 MicrohelixAla Variants" M. C. Nagan, P.
Beuning, K. Musier-Forsyth, and C. J. Cramer Nucleic Acids
Research 28 2527-2534 (2000).
1999
"Identification
of Discriminator Base Atomic Groups That Modulate the Alanine
Aminoacylation Reaction" A. Fischer, P. Beuning, and K.
Musier-Forsyth Journal of Biological Chemistry 274
37093-37096 (1999).
"Efficient
aminoacylation of tRNALys,3
by human lysyl-tRNA synthetase is dependent on covalent continuity
between acceptor stem and the anticodon domain" T. Stello, M.
Hong and K. Musier-Forsyth Nucleic Acids Research 27
4823-4829 (1999).
"Sequence-Dependent
Conformational Differences of Small RNAs Revealed by Native Gel
Electrophoresis" P. Beuning, M. Tessmer, C. Baumann, D.
Kallick, and K. Musier-Forsyth Analytical Biochemistry
273 284-290 (1999).
"Intra-tRNA
Distance Measurements for Nucleocapsid Protein-Dependent tRNA Unwinding
During Priming of HIV Reverse Transcription" B. Chan, K.
Weidemaier, W.-T. Yip, P. F. Barbara, and K. Musier-Forsyth Proceedings
of the National Academy of Sciences 96
459-464 (1999)
1998
"Subtle Functional
Interactions in the
RNA Minor Groove at a Nonessential Base Pair" B. Henderson, P. Beuning,
J.-P. Shi, R. Bald, J.P. Fuerste, V.A. Erdmann, K. Musier-Forsyth, and
P. Schimmel Journal of the American Chemical Society
120 9110-9111 (1998)
"Species-Specific
Differences in the
Operational RNA Code for Aminoacylation of tRNAPro"
C. Stehlin, B. Burke, F. Yang, H. Liu, K. Shiba, and K. Musier-Forsyth Biochemistry
37 8605-8613 (1998)
1997
"The
nucleocapsid protein specifically anneals tRNALys,3
onto a noncomplementary primer binding site within the HIV-1 RNA genome
in vitro" B. Chan and K.
Musier-Forsyth Proceedings of the National Academy of Sciences
94 13530-13535 (1997)
"Specific
Atomic Groups and RNA Helix Geometry in Acceptor Stem Recognition by a
tRNA Synthetase" P. J. Beuning, Fan Yang, P. Schimmel, and K.
Musier-Forsyth Proceedings of the National Academy of Sciences
94 10150-10154 (1997)
"Atomic
Group 'Mutagenesis' Reveals Major Groove Fine Interactions of a
tRNA Synthetase with an RNA Helix" P. J. Beuning, M. Gulotta,
and K. Musier-Forsyth Journal of the American Chemical Society
119 8397-8402 (1997)
"Human
Lysyl-tRNA Synthetase Accepts N73 Variants and Rescues E. coli
Double-Defective Mutant" K. Shiba, T. Stello, H. Motegi, T.
Noda, K. Musier-Forsyth, and P. Schimmel Journal of
Biological Chemistry 272 22809-22816
(1997)
"Chemical
Modification and Site-Directed Mutagenesis of the Single Cysteine in
Motif 3 of Class II E. coli Prolyl-tRNA Synthetase"
C. Stehlin, D. Heacock, H. Liu, and K. Musier-Forsyth Biochemistry
36 2932-2938 (1997)
1996
"Synthesis and
Aminoacyl-tRNA Synthetase
Inhibitory Activity of Prolyl Adenylate Analogs" C.J. Forsyth, D.
Heacock, K. Shiba, and K. Musier-Forsyth Bioorganic Chemistry
24 273-289 (1996)
"'Distorted' RNA Helix
Recognition" P.
Schimmel, and K. Musier-Forsyth Nature 384
422 (1996)
"Efficient introduction of
phosphorothioates into RNA oligonucleotides by
3-ethoxy-1,2,4-dithiazoline-5-one (EDITH)" Q. Xu, G. Barany, R. Hammer,
and K. Musier-Forsyth Nucleic Acids Research 24
3643-3644 (1996)
"Use of
1,2,4-dithiazolidine-3,5-dione
(DtsNH) and 3-ethoxy-1,2,4-dithiazoline-5-one (EDITH) for Synthesis of
Phosphorothioate-Containing Oligodeoxyribonucleotides" Q. Xu, K.
Musier-Forsyth, R. Hammer, and G. Barany Nucleic Acids
Research 24 1602-1607 (1996)
"Single Atomic Group in RNA
Helix Needed
for Positive and Negative tRNA Synthtase Discrimination" H. Liu, L.-P.
Yap, and K. Musier-Forsyth Journal of the American Chemical
Society 118 2523-2524 (1996)
1995
"Use of Semi-Synthetic
Transfer RNAs to
Probe Molecular Recognition by Escherichia coli
Proline-tRNA Synthetase" L.-P. Yap, C. Stehlin, and K. Musier-Forsyth Chemistry
and Biology 2 661-666 (1995)
"Evidence for
Class-Specific
Discrimination of a Semi-Conserved Base Pair by tRNA Synthetases" H.
Liu, R. Peterson, J. Kessler, and K. Musier-Forsyth Biochemistry
34 9795-9800 (1995)
"Transfer RNA
Aminoacylation:
Identification of a Critical Ribose 2'-hydroxyl-base Interaction" L.
Yap and K. Musier-Forsyth RNA 1
418-424 (1995)
"Base Analog-Induced
Aminoacylation of
an RNA Helix by a tRNA Synthetase" K. Musier-Forsyth, J.-P. Shi, B.
Henderson, R. Bald, J. Fuerste, V. Erdman, and P. SchimmelJournal
of the American Chemical Society 117
7253-7254 (1995)
"Evidence for
Class-Specific
Discrimination of a Semi-Conserved Base Pair by tRNA Synthetases" H.
Liu, R. Peterson, J. Kessler, and K. Musier-Forsyth Biochemistry
34 9795-9800 (1995)
"Molecular Recognition by Pro by Escherichia
coli Proline tRNA Synthetase in vitro"
H. Liu, R. Peterson, J. Kessler, and K. Musier-Forsyth Nucleic
Acids Research 23 165-169 (1995)
1994
"Escherichia coli
Proline tRNA Synthetase is Sensitive to Changes in the Core Region of
tRNAPro"
H. Liu, and K. Musier-Forsyth Biochemistry 33
12708-12714 (1994)
"Region of a Conserved
Sequence Motif in
a Class II tRNA Synthetase Needed for Transfer of an Activated Amino
Acid to an RNA Substrate" JP. Shi, K. Musier-Forsyth, and P. Schimmel Biochemistry
33 5312-5318 (1994)
"Acceptor Helix
Interactions in a Class
II tRNA Synthetase: Photoaffinity Cross-linking of an RNA Miniduplex
Substrate" K. Musier-Forsyth, and P. Schimmel Biochemistry
33 773-779 (1994)
1992
"Functional Contacts of a
Transfer RNA
Synthetase with 2'-Hydroxyl Groups in the RNA Minor Groove" K.
Musier-Forsyth and P. Schimmel Nature 357
513-515 (1992)
"Preferential Interaction
of Human
Immunodeficiency Virus Reverse Transcriptase with Two Regions of Primer
tRNALys
as Evidenced by Footprinting Studies and Inhibition with Synthetic
Oligoribonucleotides" L. Sarih-Cottin, B. Bordier, K. Musier-Forsyth, M
Andreola, P. Barr and S. Litvak Journal of Molecular Biology
226 1-6 (1992)
1991
"Specificity for
Aminoacylation of an
RNA Helix: An Unpaired, Exocyclic Amino Group in the Minor Groove" K.
Musier-Forsyth, N. Usman, S. Scaringe, J. Doudna, R. Green and P.
Schimmel Science 253 784-786
(1991)
"Enzymatic Aminoacylation
of
Single-Stranded RNA with an RNA Cofactor" K. Musier-Forsyth, S.
Scaringe, N. Usman and P. Schimmel Proceedings of the
National Academy of Sciences of the United States of America 88
209-213 (1991)
1990
"Rotational Dynamics of
Chloroplast ATP
Synthase" K. Musier-Forsyth and G.G. Hammes Biochemistry
29 3236-3241 (1990)
1988
"Assessment of the Number
of Nucleotide
Binding Sites in Chloroplast Coupling Factor 1 by the Continuous
Variation Method" K. Musier and G.G. Hammes Biochemistry
27 7015-7020 (1988)
1987
"Rotation of Nucleotide
Sites is Not
Required for the Enzymatic Activity of Chloroplast Coupling Factor 1"
K. Musier and G.G. Hammes Biochemistry 26
5982-5988 (1987)
1984
"Doubly Charged Ion Mass
Spectra of
Terpenes" J. Appling, K. Musier, L. Abbey and T. Moran Organic
Mass Spectrometry 19 524-527 (1984)
"Doubly Charged Ion Mass
Spectra: 8-Alkenes" J. Appling, K. Musier and T. Moran Organic
Mass Spectrometry 19 412-422 (1984)
Reviews,
Commentaries, and Book Chapters:
2009
Interactions
of
HIV-1 Capsid with Host Protein Factors. Anjali P. Mascarenhas and Karin
Musier-Forsyth (2009) FEBS Journal, submitted.
2008
The
Return of
Pretransfer Editing in Protein Synthesis. Srujana S. Yadavalli, Karin
Musier-Forsyth, and Michael Ibba (2008) Proc. Natl. Acad.
Sci. USA, 105,
19031-19032. (Commentary)
In
vitro Assays
for the Determination of Aminoacyl-tRNA Synthetase Editing Activity.
Kathryn
Splan, Michal T. Boniecki, Susan A. Martinis, and
Karin
Musier-Forsyth (Ed. Michael Ibba) (2008) Methods, 44, 119-128.
Fidelity
Mechanisms of the Aminoacyl-tRNA Synthetases. Anjali Mascarenhas, Susan
A.
Martinis, Songon An, Abbey E. Rosen, and Karin Musier-Forsyth in
Protein
Engineering (Eds. Uttam RajBhandary and Caroline Koehrer) (2008)
Springer
Verlag, pp 153-200.
2005
Nucleic
Acid
Chaperone Activity of HIV-1 Nucleocapsid Protein: Critical Role in
Reverse
Transcription and Molecular Mechanism. Judith G. Levin, Jianhui Guo,
Ioulia
Rouzina, Karin Musier-Forsyth (2005) Prog. Nucleic Acid Res. Mol.
Biol., 80,
217-286.
Alanyl-tRNA
Synthetase. Lluis Ribas de Pouplana, Karin Musier-Forsyth, and Paul
Schimmel,
in Aminoacyl-tRNA Synthetases (Eds. C. Francklyn, S. Cusack, M. Ibba),
2005,
Landes Biosciences, pp 241-149.
Class
II
Prolyl-tRNA Synthetase. Karin Musier-Forsyth, Brian Burke, and Stephen
Cusack,
in Aminoacyl-tRNA Synthetases (Eds. C. Francklyn, S. Cusack, M. Ibba),
2005,
Landes Biosciences, pp 149-161.
2000
Role
of Zinc Ion
in Translational Accuracy Becomes Crystal Clear. Karin Musier-Forsyth
and Penny
J. Beuning (2000) Nature Structural Biology, 7, 435-436. (invited News
and
Views).
1999
Transfer
RNA
Recognition by Aminoacyl-tRNA Synthetases. K. Musier-Forsyth
and P.
Beuning (1999) Biopolymers, 52, 1-28.
Atomic
Determinants for Aminoacylation of RNA Minihelices and Relationship to
Genetic
Code. Karin Musier-Forsyth and Paul Schimmel (1999) Accounts of
Chemical
Research, 32, 368-375.
1998
Transfer
RNA Acceptor Stem Determinants for Specific Aminoacylation by Class II
Aminoacyl-tRNA Synthetases. Karin Musier-Forsyth (1998) J. Biochem. and
Mol.
Biol. 31, 525-535.
1997
Aminoacyl-tRNA
Synthetases in Biology and Disease: New Evidence for
Structural and
Functional Diversity in an Ancient Family of Enzymes.
Francklyn, C.,
Musier-Forsyth, K., and Martinis, S. A. (1997) RNA, 3, 954-960.
1993
Aminoacylation
of RNA Oligonucleotides: Minimalist Structures and Origin of
Specificity.
Musier-Forsyth, K., and Schimmel, P. (1993) FASEB J., 7, 282-289.
1992
Small
RNA Helices
as Substrates for Aminoacylation and their Relationship to Charging of
Transfer
RNAs. Francklyn, C., Musier-Forsyth, K., and Schimmel, P.
(1992) Eur. J.
Biochem., 206, 315-321.
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